API Documentation

Note

This documentation only contains the functions and classes that Glycosylator implements directly. Most of the functionality is provided by BuildAMol so a majority of the documentation can be found in the BuildAMol documentation.

• Glycosylator
  • The core package
    • The Glycan
      • Making Glycans from IUPAC strings
      • Making Glycans from other inputs
      • Modifying individual sugars
      • Glycan
      • glycan()
      • read_graph()
      • read_iupac()
      • read_snfg()
      • write_iupac()
      • write_snfg()
    • The Scaffold
  • The optimizers package
    • The utils module
      • make_scaffold_graph()
    • Module contents
  • The resources package
    • The sequons module
      • SEQUONS
      • Sequon
      • add_sequon()
      • available_sequons()
      • get_default_sequons()
      • get_sequon()
      • load_sequons()
      • restore_sequons()
      • save_sequons()
      • set_default_sequons()
    • The icons module
      • get_base_color()
      • get_icon()
      • get_icon_path()
    • The names module
      • id_to_name()
      • is_beta()
  • The utils package
    • The iupac module
      • IUPACParser
      • IUPACStringMaker
      • make_iupac_string()
      • make_link_id()
      • make_snfg_string()
      • parse_iupac()
      • parse_snfg()
    • The visual module
      • Canvas
      • GlycanViewer2D
      • Node
      • ScaffoldViewer2D
      • USE_GLYCOWORK
      • dont_use_glycowork()
      • edge_label_defaults
      • use_glycowork()